How do I resolve strain-level identity when a single marker gene isn't enough?

Achieving fine-resolution, strain-level identification and functional gene screening beyond what a single marker gene can distinguish.

References

• Maiden, M.C., Bygraves, J.A., Feil, E., et al. "Multilocus Sequence Typing." Proceedings of the National Academy of Sciences 95, no. 7 (1998): 3140–3145.